Fix 'ERROR - Unable to set localhost. This prevents creation of a GUID'How do I fix “getaddrinfo: localhost Name or service not found” for telnet server?I can connect to my tomcat6 server using http://localhost:8080/ but when I replace localhost with my ip address I'm unable to connect. What gives?Nginx + uWSGI on localhost *always* gives 502 Bad Gateway. Any ideas how to solve this?WAMP - phpmyadmin 403 error from localhost, but not from IP 127.0.0.1?500 Internal Server Error when setting up Apache on localhostLocalHost errorDon't manage to set up iptables rules for client/server socket exchange on localhostUbuntu Apache Server 503 Error: disabled connection for (localhost)Unable to ssh localhost without password despite proper perms, key in authorized_keysWaiting for localhost : getting this message on all browsers

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Fix 'ERROR - Unable to set localhost. This prevents creation of a GUID'


How do I fix “getaddrinfo: localhost Name or service not found” for telnet server?I can connect to my tomcat6 server using http://localhost:8080/ but when I replace localhost with my ip address I'm unable to connect. What gives?Nginx + uWSGI on localhost *always* gives 502 Bad Gateway. Any ideas how to solve this?WAMP - phpmyadmin 403 error from localhost, but not from IP 127.0.0.1?500 Internal Server Error when setting up Apache on localhostLocalHost errorDon't manage to set up iptables rules for client/server socket exchange on localhostUbuntu Apache Server 503 Error: disabled connection for (localhost)Unable to ssh localhost without password despite proper perms, key in authorized_keysWaiting for localhost : getting this message on all browsers






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1















My program is working fine but seems I have to set 'set localhost'.



Should I do this or it's optional?
How to fix in case I should?



-sh-4.1$ sh interproscan.sh -i test_proteins.fasta -f tsv -goterms
30/05/2016 14:42:21:909 Welcome to InterProScan-5.18-57.0
2016-05-30 14:42:28,084 [main] [net.sf.ehcache.Cache:216] ERROR - Unable to set localhost. This prevents creation of a GUID. Cause was: Covoserver: Covoserver: unknown error
java.net.UnknownHostException: Covoserver: Covoserver: unknown error
 at java.net.InetAddress.getLocalHost(InetAddress.java:1484)
 at net.sf.ehcache.Cache.<clinit>(Cache.java:214)
 at net.sf.ehcache.config.ConfigurationHelper.createCache(ConfigurationHelper.java:296)
 at net.sf.ehcache.config.ConfigurationHelper.createDefaultCache(ConfigurationHelper.java:219)
 at net.sf.ehcache.CacheManager.configure(CacheManager.java:722)
 at net.sf.ehcache.CacheManager.doInit(CacheManager.java:439)
 at net.sf.ehcache.CacheManager.init(CacheManager.java:377)
 at net.sf.ehcache.CacheManager.<init>(CacheManager.java:259)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1037)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1013)
 at net.sf.ehcache.CacheManager.create(CacheManager.java:998)
 at org.springframework.cache.ehcache.EhCacheManagerFactoryBean.afterPropertiesSet(EhCacheManagerFactoryBean.java:139)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1637)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1574)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:545)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:140)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:84)
 at uk.ac.ebi.interpro.scan.management.model.implementations.writer.GraphicalOutputResultWriter.setApplicationContextConfigLocation(GraphicalOutputResultWriter.java:64)
 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
 at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
 at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
 at java.lang.reflect.Method.invoke(Method.java:497)
 at org.springframework.beans.BeanWrapperImpl$BeanPropertyHandler.setValue(BeanWrapperImpl.java:346)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:454)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:280)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:95)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:75)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1514)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:93)
 at uk.ac.ebi.interpro.scan.jms.main.Run.main(Run.java:178)
Caused by: java.net.UnknownHostException: Covoserver: unknown error
 at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
 at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:907)
 at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1302)
 at java.net.InetAddress.getLocalHost(InetAddress.java:1479)
 ... 68 more
30/05/2016 14:42:29:640 Running InterProScan v5 in STANDALONE mode...
30/05/2016 14:42:43:800 Loading file /home/bernardo/Databases/my_interproscan/interproscan-5.18-57.0/test_proteins.fasta
30/05/2016 14:42:43:805 Running the following analyses:
[PIRSF-3.01,Pfam-29.0,PRINTS-42.0,ProSiteProfiles-20.119,PANTHER-10.0,Coils-2.2.1,Hamap-201511.02,ProSitePatterns-20.119,SUPERFAMILY-1.75,ProDom-2006.1,SMART-7.1,Gene3D-3.5.0,TIGRFAM-15.0]
Available matches will be retrieved from the pre-calculated match lookup service.

Matches for any sequences that are not represented in the lookup service will be calculated locally.
30/05/2016 14:42:45:374 29% completed
30/05/2016 14:42:50:666 57% completed
30/05/2016 14:42:56:783 86% completed
30/05/2016 14:43:01:933 100% done: InterProScan analyses completed





localhost







share|improve this question






















  • Your best bet is to seek help from the developer of that component.

    – Michael Hampton♦
    May 30 '16 at 17:06

















1















My program is working fine but seems I have to set 'set localhost'.



Should I do this or it's optional?
How to fix in case I should?



-sh-4.1$ sh interproscan.sh -i test_proteins.fasta -f tsv -goterms
30/05/2016 14:42:21:909 Welcome to InterProScan-5.18-57.0
2016-05-30 14:42:28,084 [main] [net.sf.ehcache.Cache:216] ERROR - Unable to set localhost. This prevents creation of a GUID. Cause was: Covoserver: Covoserver: unknown error
java.net.UnknownHostException: Covoserver: Covoserver: unknown error
 at java.net.InetAddress.getLocalHost(InetAddress.java:1484)
 at net.sf.ehcache.Cache.<clinit>(Cache.java:214)
 at net.sf.ehcache.config.ConfigurationHelper.createCache(ConfigurationHelper.java:296)
 at net.sf.ehcache.config.ConfigurationHelper.createDefaultCache(ConfigurationHelper.java:219)
 at net.sf.ehcache.CacheManager.configure(CacheManager.java:722)
 at net.sf.ehcache.CacheManager.doInit(CacheManager.java:439)
 at net.sf.ehcache.CacheManager.init(CacheManager.java:377)
 at net.sf.ehcache.CacheManager.<init>(CacheManager.java:259)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1037)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1013)
 at net.sf.ehcache.CacheManager.create(CacheManager.java:998)
 at org.springframework.cache.ehcache.EhCacheManagerFactoryBean.afterPropertiesSet(EhCacheManagerFactoryBean.java:139)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1637)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1574)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:545)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:140)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:84)
 at uk.ac.ebi.interpro.scan.management.model.implementations.writer.GraphicalOutputResultWriter.setApplicationContextConfigLocation(GraphicalOutputResultWriter.java:64)
 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
 at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
 at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
 at java.lang.reflect.Method.invoke(Method.java:497)
 at org.springframework.beans.BeanWrapperImpl$BeanPropertyHandler.setValue(BeanWrapperImpl.java:346)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:454)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:280)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:95)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:75)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1514)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:93)
 at uk.ac.ebi.interpro.scan.jms.main.Run.main(Run.java:178)
Caused by: java.net.UnknownHostException: Covoserver: unknown error
 at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
 at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:907)
 at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1302)
 at java.net.InetAddress.getLocalHost(InetAddress.java:1479)
 ... 68 more
30/05/2016 14:42:29:640 Running InterProScan v5 in STANDALONE mode...
30/05/2016 14:42:43:800 Loading file /home/bernardo/Databases/my_interproscan/interproscan-5.18-57.0/test_proteins.fasta
30/05/2016 14:42:43:805 Running the following analyses:
[PIRSF-3.01,Pfam-29.0,PRINTS-42.0,ProSiteProfiles-20.119,PANTHER-10.0,Coils-2.2.1,Hamap-201511.02,ProSitePatterns-20.119,SUPERFAMILY-1.75,ProDom-2006.1,SMART-7.1,Gene3D-3.5.0,TIGRFAM-15.0]
Available matches will be retrieved from the pre-calculated match lookup service.

Matches for any sequences that are not represented in the lookup service will be calculated locally.
30/05/2016 14:42:45:374 29% completed
30/05/2016 14:42:50:666 57% completed
30/05/2016 14:42:56:783 86% completed
30/05/2016 14:43:01:933 100% done: InterProScan analyses completed





localhost







share|improve this question






















  • Your best bet is to seek help from the developer of that component.

    – Michael Hampton♦
    May 30 '16 at 17:06













1












1








1








My program is working fine but seems I have to set 'set localhost'.



Should I do this or it's optional?
How to fix in case I should?



-sh-4.1$ sh interproscan.sh -i test_proteins.fasta -f tsv -goterms
30/05/2016 14:42:21:909 Welcome to InterProScan-5.18-57.0
2016-05-30 14:42:28,084 [main] [net.sf.ehcache.Cache:216] ERROR - Unable to set localhost. This prevents creation of a GUID. Cause was: Covoserver: Covoserver: unknown error
java.net.UnknownHostException: Covoserver: Covoserver: unknown error
 at java.net.InetAddress.getLocalHost(InetAddress.java:1484)
 at net.sf.ehcache.Cache.<clinit>(Cache.java:214)
 at net.sf.ehcache.config.ConfigurationHelper.createCache(ConfigurationHelper.java:296)
 at net.sf.ehcache.config.ConfigurationHelper.createDefaultCache(ConfigurationHelper.java:219)
 at net.sf.ehcache.CacheManager.configure(CacheManager.java:722)
 at net.sf.ehcache.CacheManager.doInit(CacheManager.java:439)
 at net.sf.ehcache.CacheManager.init(CacheManager.java:377)
 at net.sf.ehcache.CacheManager.<init>(CacheManager.java:259)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1037)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1013)
 at net.sf.ehcache.CacheManager.create(CacheManager.java:998)
 at org.springframework.cache.ehcache.EhCacheManagerFactoryBean.afterPropertiesSet(EhCacheManagerFactoryBean.java:139)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1637)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1574)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:545)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:140)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:84)
 at uk.ac.ebi.interpro.scan.management.model.implementations.writer.GraphicalOutputResultWriter.setApplicationContextConfigLocation(GraphicalOutputResultWriter.java:64)
 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
 at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
 at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
 at java.lang.reflect.Method.invoke(Method.java:497)
 at org.springframework.beans.BeanWrapperImpl$BeanPropertyHandler.setValue(BeanWrapperImpl.java:346)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:454)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:280)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:95)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:75)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1514)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:93)
 at uk.ac.ebi.interpro.scan.jms.main.Run.main(Run.java:178)
Caused by: java.net.UnknownHostException: Covoserver: unknown error
 at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
 at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:907)
 at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1302)
 at java.net.InetAddress.getLocalHost(InetAddress.java:1479)
 ... 68 more
30/05/2016 14:42:29:640 Running InterProScan v5 in STANDALONE mode...
30/05/2016 14:42:43:800 Loading file /home/bernardo/Databases/my_interproscan/interproscan-5.18-57.0/test_proteins.fasta
30/05/2016 14:42:43:805 Running the following analyses:
[PIRSF-3.01,Pfam-29.0,PRINTS-42.0,ProSiteProfiles-20.119,PANTHER-10.0,Coils-2.2.1,Hamap-201511.02,ProSitePatterns-20.119,SUPERFAMILY-1.75,ProDom-2006.1,SMART-7.1,Gene3D-3.5.0,TIGRFAM-15.0]
Available matches will be retrieved from the pre-calculated match lookup service.

Matches for any sequences that are not represented in the lookup service will be calculated locally.
30/05/2016 14:42:45:374 29% completed
30/05/2016 14:42:50:666 57% completed
30/05/2016 14:42:56:783 86% completed
30/05/2016 14:43:01:933 100% done: InterProScan analyses completed





localhost







share|improve this question














My program is working fine but seems I have to set 'set localhost'.



Should I do this or it's optional?
How to fix in case I should?



-sh-4.1$ sh interproscan.sh -i test_proteins.fasta -f tsv -goterms
30/05/2016 14:42:21:909 Welcome to InterProScan-5.18-57.0
2016-05-30 14:42:28,084 [main] [net.sf.ehcache.Cache:216] ERROR - Unable to set localhost. This prevents creation of a GUID. Cause was: Covoserver: Covoserver: unknown error
java.net.UnknownHostException: Covoserver: Covoserver: unknown error
 at java.net.InetAddress.getLocalHost(InetAddress.java:1484)
 at net.sf.ehcache.Cache.<clinit>(Cache.java:214)
 at net.sf.ehcache.config.ConfigurationHelper.createCache(ConfigurationHelper.java:296)
 at net.sf.ehcache.config.ConfigurationHelper.createDefaultCache(ConfigurationHelper.java:219)
 at net.sf.ehcache.CacheManager.configure(CacheManager.java:722)
 at net.sf.ehcache.CacheManager.doInit(CacheManager.java:439)
 at net.sf.ehcache.CacheManager.init(CacheManager.java:377)
 at net.sf.ehcache.CacheManager.<init>(CacheManager.java:259)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1037)
 at net.sf.ehcache.CacheManager.newInstance(CacheManager.java:1013)
 at net.sf.ehcache.CacheManager.create(CacheManager.java:998)
 at org.springframework.cache.ehcache.EhCacheManagerFactoryBean.afterPropertiesSet(EhCacheManagerFactoryBean.java:139)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1637)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1574)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:545)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:351)
 at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:108)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1481)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:140)
 at org.springframework.context.support.FileSystemXmlApplicationContext.<init>(FileSystemXmlApplicationContext.java:84)
 at uk.ac.ebi.interpro.scan.management.model.implementations.writer.GraphicalOutputResultWriter.setApplicationContextConfigLocation(GraphicalOutputResultWriter.java:64)
 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
 at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
 at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
 at java.lang.reflect.Method.invoke(Method.java:497)
 at org.springframework.beans.BeanWrapperImpl$BeanPropertyHandler.setValue(BeanWrapperImpl.java:346)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:454)
 at org.springframework.beans.AbstractNestablePropertyAccessor.setPropertyValue(AbstractNestablePropertyAccessor.java:280)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:95)
 at org.springframework.beans.AbstractPropertyAccessor.setPropertyValues(AbstractPropertyAccessor.java:75)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyPropertyValues(AbstractAutowireCapableBeanFactory.java:1514)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1226)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:543)
 at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:482)
 at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:305)
 at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
 at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:301)
 at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:196)
 at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:772)
 at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:835)
 at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:537)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139)
 at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:93)
 at uk.ac.ebi.interpro.scan.jms.main.Run.main(Run.java:178)
Caused by: java.net.UnknownHostException: Covoserver: unknown error
 at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
 at java.net.InetAddress$2.lookupAllHostAddr(InetAddress.java:907)
 at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1302)
 at java.net.InetAddress.getLocalHost(InetAddress.java:1479)
 ... 68 more
30/05/2016 14:42:29:640 Running InterProScan v5 in STANDALONE mode...
30/05/2016 14:42:43:800 Loading file /home/bernardo/Databases/my_interproscan/interproscan-5.18-57.0/test_proteins.fasta
30/05/2016 14:42:43:805 Running the following analyses:
[PIRSF-3.01,Pfam-29.0,PRINTS-42.0,ProSiteProfiles-20.119,PANTHER-10.0,Coils-2.2.1,Hamap-201511.02,ProSitePatterns-20.119,SUPERFAMILY-1.75,ProDom-2006.1,SMART-7.1,Gene3D-3.5.0,TIGRFAM-15.0]
Available matches will be retrieved from the pre-calculated match lookup service.

Matches for any sequences that are not represented in the lookup service will be calculated locally.
30/05/2016 14:42:45:374 29% completed
30/05/2016 14:42:50:666 57% completed
30/05/2016 14:42:56:783 86% completed
30/05/2016 14:43:01:933 100% done: InterProScan analyses completed





localhost




localhost






share|improve this question













share|improve this question











share|improve this question




share|improve this question










asked May 30 '16 at 11:50









biotechbiotech

1024




1024












  • Your best bet is to seek help from the developer of that component.

    – Michael Hampton♦
    May 30 '16 at 17:06

















  • Your best bet is to seek help from the developer of that component.

    – Michael Hampton♦
    May 30 '16 at 17:06
















Your best bet is to seek help from the developer of that component.

– Michael Hampton♦
May 30 '16 at 17:06





Your best bet is to seek help from the developer of that component.

– Michael Hampton♦
May 30 '16 at 17:06










1 Answer
1






active

oldest

votes


















0














Step 1:Open your hosts file:



vim /etc/hosts


Step 2:Add dns resolv



127.0.0.1 Covoserver


Hope this could solve your problem,it works in my machine.






share|improve this answer























    Your Answer








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    1 Answer
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    1 Answer
    1






    active

    oldest

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    active

    oldest

    votes






    active

    oldest

    votes









    0














    Step 1:Open your hosts file:



    vim /etc/hosts


    Step 2:Add dns resolv



    127.0.0.1 Covoserver


    Hope this could solve your problem,it works in my machine.






    share|improve this answer



























      0














      Step 1:Open your hosts file:



      vim /etc/hosts


      Step 2:Add dns resolv



      127.0.0.1 Covoserver


      Hope this could solve your problem,it works in my machine.






      share|improve this answer

























        0












        0








        0







        Step 1:Open your hosts file:



        vim /etc/hosts


        Step 2:Add dns resolv



        127.0.0.1 Covoserver


        Hope this could solve your problem,it works in my machine.






        share|improve this answer













        Step 1:Open your hosts file:



        vim /etc/hosts


        Step 2:Add dns resolv



        127.0.0.1 Covoserver


        Hope this could solve your problem,it works in my machine.







        share|improve this answer












        share|improve this answer



        share|improve this answer










        answered Mar 26 '18 at 4:22









        DolphinDolphin

        1012




        1012



























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